In two human skin conductance conditioning experiments we investigated whether processing of stimulus compounds can be influenced by past experience. Participants were either pre-trained with a discrimination problem that could be solved elementally (A+, B-, AB+, C- in Experiment 1 and A+, AB+, C-, CB- in Experiment 2) or one that required a configural solution (AB+, BC-, CD+, DA- in Experiment 1 and A-, AB+, C+, CB- in Experiment 2). After pre-training, participants were shown an EX+, FX- discrimination. Subsequently, responding to individual components (E and F) was tested. After elemental pre-training, participants showed larger responses to the component from the previously reinforced compound (E) than to the component from the nonreinforced compound (F) whereas no such difference was found after configural pre-training. This means that the kind of pre-training influenced whether the later discrimination problem was processed elementally or configurally. The results indicate that organisms can flexibly process stimulus compounds in different ways.